Przytycka, T. M.: search on Z-Library

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1

Analysis of F9 point mutations and their correlation to severity of haemophilia B disease

N. Hamasaki-Katagiri, R. Salari, V. L. Simhadri, S. C. Tseng, E. Needlman, N. C. Edwards, Z. E. Sauna, V. Grigoryan, A. A. Komar, T. M. Przytycka, C. Kimchi-Sarfaty

Journal:

Year:

2012

Language:

english

File:

PDF, 204 KB

english, 2012

2

Parallel recognition of complement reducible graphs and cotree construction

D.G. Kirkpatrick, T. Przytycka

Journal:

Discrete Applied Mathematics

Year:

1990

Language:

english

File:

PDF, 1.06 MB

english, 1990

3

Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture

Jothi, Raja, Balaji, S, Wuster, Arthur, Grochow, Joshua A, Gsponer, Jörg, Przytycka, Teresa M, Aravind, L, Babu, M Madan

Journal:

Molecular Systems Biology

Year:

2009

Language:

english

File:

PDF, 2.58 MB

english, 2009

4

Embedding gene sets in low-dimensional space

Hoinka, Jan, Przytycka, Teresa M.

Journal:

Nature Machine Intelligence

Year:

2020

File:

PDF, 841 KB

2020

5

MONET: Multi-omic module discovery by omic selection

Rappoport, Nimrod, Safra, Roy, Shamir, Ron, Przytycka, Teresa M.

Journal:

PLoS Computational Biology

Year:

2020

File:

PDF, 4.05 MB

2020

6

Chapter 5: Network Biology Approach to Complex Diseases

Cho, Dong-Yeon, Kim, Yoo-Ah, Przytycka, Teresa M., Lewitter, Fran, Kann, Maricel

Journal:

PLoS Computational Biology

Year:

2012

Language:

english

File:

PDF, 394 KB

english, 2012

7

Mediation ofDrosophilaautosomal dosage effects and compensation by network interactions

John H Malone, Dong-Yeon Cho, Nicolas R Mattiuzzo, Carlo G Artieri, Lichun Jiang, Ryan K Dale, Harold E Smith, Jennifer McDaniel, Sarah Munro, Marc Salit, Justen Andrews, Teresa M Przytycka, Brian Oli

Journal:

Year:

2012

Language:

english

File:

PDF, 2.97 MB

english, 2012

8

Modeling information flow in biological networks

Kim, Yoo-Ah, Przytycki, Jozef H, Wuchty, Stefan, Przytycka, Teresa M

Journal:

Physical Biology

Year:

2011

Language:

english

File:

PDF, 3.33 MB

english, 2011

9

[Lecture Notes in Computer Science] Algorithms in Bioinformatics Volume 6833 || Learning Protein Functions from Bi-relational Graph of Proteins and Function Annotations

Przytycka, Teresa M., Sagot, Marie-France

Year:

2011

Language:

english

File:

PDF, 300 KB

english, 2011

10

Phenotypic Signatures Arising from Unbalanced Bacterial Growth

Tan, Cheemeng, Smith, Robert Phillip, Tsai, Ming-Chi, Schwartz, Russell, You, Lingchong, Przytycka, Teresa M.

Journal:

PLoS Computational Biology

Year:

2014

Language:

english

File:

PDF, 757 KB

english, 2014

11

[ACM Press the ACM Conference - Orlando, Florida (2012.10.07-2012.10.10)] Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine - BCB '12 - Integration of genomic and epigenomic features to predict meiotic recombination hotspots in human and mouse

Wu, Min, Kwoh, Chee Keong, Przytycka, Teresa M., Li, Jing, Zheng, Jie

Year:

2012

Language:

english

File:

PDF, 248 KB

english, 2012

12

Significance of conformational biases in Monte Carlo simulations of protein folding: Lessons from Metropolis–Hastings approach

Teresa Przytycka

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2004

Language:

english

File:

PDF, 277 KB

english, 2004

13

Epigenetic functions enriched in transcription factors binding to mouse recombination hotspots

Wu, Min, Kwoh, Chee-Keong, Przytycka, Teresa M, Li, Jing, Zheng, Jie

Journal:

Proteome Science

Year:

2012

Language:

english

File:

PDF, 967 KB

english, 2012

14

Constructing Huffman Trees in Parallel

Larmore, Lawrence L., Przytycka, Teresa M.

Journal:

SIAM Journal on Computing

Year:

1995

Language:

english

File:

PDF, 858 KB

english, 1995

15

Detecting sequence polymorphisms associated with meiotic recombination hotspots in the human genome

Jie Zheng, Pavel P Khil, R Daniel Camerini-Otero, Teresa M Przytycka

Journal:

Year:

2010

Language:

english

File:

PDF, 1.07 MB

english, 2010

16

[Computational Biology] Protein-protein Interactions and Networks Volume 9 || Experimental Methods for Protein Interaction Identification and Characterization

Panchenko, Anna, Przytycka, Teresa

Year:

2008

Language:

english

File:

PDF, 1.26 MB

english, 2008

17

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 9029 || Immunoglobulin Classification Using the Colored Antibody Graph

Przytycka, Teresa M.

Year:

2015

Language:

english

File:

PDF, 672 KB

english, 2015

18

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 9029 || Protein Contact Prediction by Integrating Joint Evolutionary Coupling Analysis and Supervised Learning

Przytycka, Teresa M.

Year:

2015

Language:

english

File:

PDF, 704 KB

english, 2015

19

A 2′FY-RNA Motif Defines an Aptamer for Ebolavirus Secreted Protein

Shubham, Shambhavi, Hoinka, Jan, Banerjee, Soma, Swanson, Emma, Dillard, Jacob A., Lennemann, Nicholas J., Przytycka, Teresa M., Maury, Wendy, Nilsen-Hamilton, Marit

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 2.70 MB

english, 2018

20

Parallel algorithms for parity graphs

T Przytycka, D.G Corneil

Journal:

Journal of Algorithms

Year:

1991

Language:

english

File:

PDF, 782 KB

english, 1991

21

[Computational Biology] Protein-protein Interactions and Networks Volume 9 || Handling Diverse Protein Interaction Data: Integration, Storage and Retrieval

Panchenko, Anna, Przytycka, Teresa

Year:

2008

Language:

english

File:

PDF, 509 KB

english, 2008

22

[Lecture Notes in Computer Science] Advances in Bioinformatics and Computational Biology Volume 5676 || MHC: Peptide Analysis: Implications on the Immunogenicity of Hantaviruses’ N protein

Guimarães, Katia S., Panchenko, Anna, Przytycka, Teresa M.

Year:

2009

Language:

english

File:

PDF, 167 KB

english, 2009

23

Generalized logical model based on network topology to capture the dynamical trends of cellular signaling pathways

Zhang, Fan, Chen, Haoting, Zhao, Li Na, Liu, Hui, Przytycka, Teresa M., Zheng, Jie

Journal:

BMC Systems Biology

Year:

2016

Language:

english

File:

PDF, 1.12 MB

english, 2016

24

AptaBlocks Online: A Web-Based Toolkit for the In Silico Design of Oligonucleotide Sticky Bridges

Hoinka, Jan, Wang, Yijie, Przytycka, Teresa M.

Journal:

Journal of Computational Biology

Year:

2020

Language:

english

File:

PDF, 1.29 MB

english, 2020

25

LMSM: AÂ modular approach for identifying lncRNA related miRNA sponge modules in breast cancer

Zhang, Junpeng, Xu, Taosheng, Liu, Lin, Zhang, Wu, Zhao, Chunwen, Li, Sijing, Li, Jiuyong, Rao, Nini, Le, Thuc Duy, Przytycka, Teresa M.

Journal:

PLoS Computational Biology

Year:

2020

File:

PDF, 4.68 MB

2020

26

The Optimal Alphabetic Tree Problem Revisited

Lawrence L Larmore, Teresa M Przytycka

Journal:

Journal of Algorithms

Year:

1998

Language:

english

File:

PDF, 202 KB

english, 1998

27

Network integration meets network dynamics

Teresa M Przytycka, Yoo-Ah Kim

Journal:

Year:

2010

Language:

english

File:

PDF, 392 KB

english, 2010

28

Differences in evolutionary pressure acting within highly conserved ortholog groups

Teresa M Przytycka, Raja Jothi, L Aravind, David J Lipman

Journal:

BMC Evolutionary Biology

Year:

2008

Language:

english

File:

PDF, 622 KB

english, 2008

29

[Computational Biology] Protein-protein Interactions and Networks Volume 9 || Principles of Protein Recognition and Properties of Protein-protein Interfaces

Panchenko, Anna, Przytycka, Teresa

Year:

2008

Language:

english

File:

PDF, 463 KB

english, 2008

30

Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage

Huang, Y., Koonin, E. V., Lipman, D. J., Przytycka, T. M.

Journal:

Nucleic Acids Research

Year:

2009

Language:

english

File:

PDF, 4.55 MB

english, 2009

31

Identification of sequence-structure RNA binding motifs for SELEX-derived aptamers

Hoinka, J., Zotenko, E., Friedman, A., Sauna, Z. E., Przytycka, T. M.

Journal:

Year:

2012

Language:

english

File:

PDF, 957 KB

english, 2012

32

A Parallel Algorithm for Optimum Height-Limited Alphabetic Binary Trees

Lawrence L. Larmore, Teresa M. Przytycka

Journal:

Journal of Parallel and Distributed Computing

Year:

1996

Language:

english

File:

PDF, 317 KB

english, 1996

33

A Fast Algorithm For Optimum Height-Limited Alphabetic Binary Trees

Larmore, Lawrence L., Przytycka, Teresa M.

Journal:

SIAM Journal on Computing

Year:

1994

Language:

english

File:

PDF, 3.31 MB

english, 1994

34

[Computational Biology] Protein-protein Interactions and Networks Volume 9 || Computational Methods to Predict Protein Interaction Partners

Panchenko, Anna, Przytycka, Teresa

Year:

2008

Language:

english

File:

PDF, 361 KB

english, 2008

35

LDsplit: screening forcis-regulatory motifs stimulating meiotic recombination hotspots by analysis of DNA sequence polymorphisms

Yang, Peng, Wu, Min, Guo, Jing, Kwoh, Chee, Przytycka, Teresa M, Zheng, Jie

Journal:

BMC Bioinformatics

Year:

2014

Language:

english

File:

PDF, 665 KB

english, 2014

36

Sensitive measurement of single-nucleotide polymorphism-induced changes of RNA conformation: application to disease studies

Salari, R., Kimchi-Sarfaty, C., Gottesman, M. M., Przytycka, T. M.

Journal:

Nucleic Acids Research

Year:

2013

Language:

english

File:

PDF, 465 KB

english, 2013

37

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 9029 || Efficient Alignment Free Sequence Comparison with Bounded Mismatches

Przytycka, Teresa M.

Year:

2015

Language:

english

File:

PDF, 267 KB

english, 2015

38

CDSeq: A novel complete deconvolution method for dissecting heterogeneous samples using gene expression data

Kang, Kai, Meng, Qian, Shats, Igor, Umbach, David M., Li, Melissa, Li, Yuanyuan, Li, Xiaoling, Li, Leping, Przytycka, Teresa M.

Journal:

PLoS Computational Biology

Year:

2019

File:

PDF, 4.25 MB

2019

39

Recursive domains in proteins

Teresa Przytycka, Rajgopal Srinivasan, George D. Rose

Journal:

Protein Science

Year:

2002

Language:

english

File:

PDF, 879 KB

english, 2002

40

Correlated Evolution of Interacting Proteins: Looking Behind the Mirrortree

Maricel G. Kann, Benjamin A. Shoemaker, Anna R. Panchenko, Teresa M. Przytycka

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 1.04 MB

english, 2009

41

Asymptotically Optimal Election on Weighted Rings

Higham, Lisa, Przytycka, Teresa

Journal:

SIAM Journal on Computing

Year:

1998

Language:

english

File:

PDF, 302 KB

english, 1998

42

[Lecture Notes in Computer Science] Advances in Bioinformatics and Computational Biology Volume 5676 || Comparing Methods for Multilabel Classification of Proteins Using Machine Learning Techniques

Guimarães, Katia S., Panchenko, Anna, Przytycka, Teresa M.

Year:

2009

Language:

english

File:

PDF, 228 KB

english, 2009

43

[Computational Biology] Protein-protein Interactions and Networks Volume 9 || Protein Interaction Network Based Prediction of Domain-Domain and Domain-Peptide Interactions

Panchenko, Anna, Przytycka, Teresa

Year:

2008

Language:

english

File:

PDF, 390 KB

english, 2008

44

[Lecture Notes in Computer Science] Advances in Bioinformatics and Computational Biology Volume 5676 ||

Guimarães, Katia S., Panchenko, Anna, Przytycka, Teresa M.

Year:

2009

Language:

english

File:

PDF, 3.87 MB

english, 2009

45

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 9029 || Functional Alignment of Metabolic Networks

Przytycka, Teresa M.

Year:

2015

Language:

english

File:

PDF, 227 KB

english, 2015

46

A Self-Directed Method for Cell-Type Identification and Separation of Gene Expression Microarrays

Zuckerman, Neta S., Noam, Yair, Goldsmith, Andrea J., Lee, Peter P., Przytycka, Teresa M.

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 1.67 MB

english, 2013

47

From hype to reality: data science enabling personalized medicine

Fröhlich, Holger, Balling, Rudi, Beerenwinkel, Niko, Kohlbacher, Oliver, Kumar, Santosh, Lengauer, Thomas, Maathuis, Marloes H., Moreau, Yves, Murphy, Susan A., Przytycka, Teresa M., Rebhan, Michael,

Journal:

Year:

2018

Language:

english

File:

PDF, 2.39 MB

english, 2018

48

A simple, efficient algorithm for maximum finding on rings

Lisa Higham, Teresa Przytycka

Journal:

Information Processing Letters

Year:

1996

Language:

english

File:

PDF, 560 KB

english, 1996

49

[Lecture Notes in Computer Science] Algorithms in Bioinformatics Volume 6833 ||

Przytycka, Teresa M., Sagot, Marie-France

Year:

2011

Language:

english

File:

PDF, 8.00 MB

english, 2011

50

[Lecture Notes in Computer Science] Advances in Bioinformatics and Computational Biology Volume 5676 || An Ontology to Integrate Transcriptomics and Interatomics Data Involved in Gene Pathways of Genome Stability

Guimarães, Katia S., Panchenko, Anna, Przytycka, Teresa M.

Year:

2009

Language:

english

File:

PDF, 176 KB

english, 2009

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